Data Carpentry Genomics

University of Kansas (KU); Kansas State University (K-State)

August 18–19, 2026

9:00 am - 4:30 pm CDT

Instructors: Vanna Hay (KU), Caroline Kisielinski, PhD (KU)

Helpers: Kristie Beaty, PhD (KU), Jamene Brooks-Kieffer (KU), E Durham (KU), April Friedl (KU), Austin Nguyen (KU), Carol Sevin (K-State), Teresa Shippy, PhD (K-State), Gwendolyn Sibley (K-State), Kendra Spahr (K-State), Will Tank, PhD (K-State)

Registration

This is a in-person, multi-site workshop taking place at The University of Kansas (KU) and Kansas State University (K-State). The workshop will not be recorded. Registration is free and required.

University of Kansas

KU's registration and waitlist for this workshop are full.

Kansas State University

To attend the workshop on K-State's Manhattan campus, register through K-State Libraries' workshops calendar.

The Carpentries

The Carpentries project comprises the Data Carpentry, High-Performance Computing Carpentry, Library Carpentry, and Software Carpentry communities of Instructors, Trainers, Maintainers, helpers, and supporters who share a mission to teach foundational computational and data science skills to researchers.

Data Carpentry develops and teaches workshops on the fundamental data skills needed to conduct research. Its target audience is researchers who have little to no prior computational experience, and its lessons are domain specific, building on learners' existing knowledge to enable them to quickly apply skills learned to their own research. Participants will be encouraged to help one another and to apply what they have learned to their own research problems.

For more information on what we teach and why, please see our paper "Good Enough Practices for Scientific Computing".

Carpentries Clippings

Want to learn more and stay engaged with The Carpentries?

Carpentries Clippings is The Carpentries' biweekly newsletter, where we share community news, community job postings, and more.

Code of Conduct

Everyone who participates in Carpentries activities is required to conform to the Code of Conduct, which also outlines how to report an incident if needed.

Workshop Logistics
Who

Who: The course is aimed at graduate students and other researchers. You don't need to have any previous knowledge of the tools that will be presented at the workshop.

Where

This is a mulit-site, in-person training taking place simultaneously on KU Lawrence and K-State Manhattan campuses. Learners registered to attend in-person on the KU Lawrence campus: Watson Library (Room 455), 1425 Jayhawk Boulevard, Lawrence, KS. Get directions with OpenStreetMap or Google Maps. Learners registered to attend in-person on the K-State Manhattan campus: Hale Library (Room 407), 1117 Mid-Campus Drive North, Manhattan, KS 66506. Get directions with OpenStreetMap or Google Maps.

When

August 18–19, 2026; 9:00 am - 4:30 pm CDT Add to your Google Calendar.

Requirements

Participants must bring a laptop with a Mac, Linux, or Windows operating system (not a tablet, Chromebook, etc.). They should have a few specific software packages installed (listed below).

Accessibility

We are committed to making this workshop accessible to everybody. The workshop organizers have checked that:

  • The room is wheelchair / scooter accessible.
  • Accessible restrooms are available.

We are dedicated to providing a positive and accessible learning environment for all. We do not require participants to provide documentation of disabilities or disclose any unnecessary personal information. However, we do want to help create an inclusive, accessible experience for all participants. We encourage you to share any information that would be helpful to make your Carpentries experience accessible. To request accessibility support for this workshop, please fill out the accessibility support request form. If you have questions or need assistance with the accessibility support form please email us.

Glosario is a multilingual glossary for computing and data science terms. The glossary helps learners attend workshops and use our lessons to make sense of computational and programming jargon written in English by offering it in their native language. Translating data science terms also provides a teaching tool for Carpentries Instructors to reduce barriers for their learners.

Workshop Recordings

Carpentries workshops are designed to be interactive rather than lecture-based, with lessons that build upon one another. To foster a positive online learning environment, we strongly recommend that participants join in real time. As a result, workshop recordings are not recommended and may not be available to learners.

Contact

Please email emdurham@ku.edu or grsibley@ksu.edu for more information.

Workshop FAQ

For answers to frequently asked questions about workshops, refer to the Carpentries Workshop FAQ.

Collaborative Notes

We will use this collaborative document, called an Etherpad, for chatting, taking notes, and sharing URLs and bits of code.

Surveys
Pre-Workshop Survey

Please fill out this survey before attending the workshop.

Fill Out the Pre-Workshop Survey
Post-Workshop Survey

Please fill out this survey before you leave the workshop.

Fill Out the Post-Workshop Survey
Schedule

Setup

To participate in this Data Carpentry Genomics workshop, you will need a spreadsheet program such as Microsoft Excel installed on your computer. You will also need access to an up-to-date web browser. We will access the Unix Shell and workshop data through remote computing instances.

Spreadsheet Software

If you don't have a spreadsheet program already, you can use Libre Office, a free, open source spreadsheet program.

Windows

Download the Installer: Install LibreOffice by going to the installation page. The version for Windows should automatically be selected. Click Download.You will go to a page that asks about a donation, but you don't need to make one.

Mac OS

Download the Installer: Install LibreOffice by going to the installation page. The version for Mac OS should automatically be selected. Click Download. You will go to a page that asks about a donation, but you don't need to make one.

Linux

Download the Installer: Install LibreOffice by going to the installation page. The version for Linux should automatically be selected. Click Download. You will go to a page that asks about a donation, but you don't need to make one.